API documentation

• hypothesis_testing module
  • correct_for_multiple_testing()
  • p_values()
  • p_values_list()
  • run_hypothesis_test()
  • run_hypothesis_test_on()
• neighbors module
  • cos_directionality()
  • cos_directionality_batched()
  • find_neighbors()
  • find_neighbors_in_direction_of_velocity()
  • find_neighbors_in_direction_of_velocity_multiple()
  • select_neighbors_based_on_cos()
  • select_neighbors_based_on_cos_batched()
• plotting module
  • arrow_plot()
  • compute_angle_on_gridplot_between()
  • compute_optimal_velocity()
  • compute_velocity_on_grid()
  • cosine_similarity()
  • get_glyph_colors()
  • marker_plot()
  • plot_best_possible_velocities_statistic()
  • plot_labels()
  • plot_neighborhood()
  • plot_optimal_velocity()
  • plot_statistic_distribution()
  • plot_uniformity_histogram()
  • scatter()
• test_statistic module
  • cos_directionality_one_cell_batch_same_neighbors()
  • cos_directionality_one_cell_one_neighborhood()
  • mean_cos_directionality_varying_neighborhoods_same_neighbors()
  • mean_cos_directionality_varying_neighbors()
  • mean_cos_directionality_varying_neighbors_parallel()
  • mean_cos_directionality_varying_neighbors_torch()